v1.0 - cleanup

config/netcdf_c.json

@@ -1,10 +0,0 @@
-{
-    "name" : "netcdf-c",
-    "default version" : "4.7.4",
-    "dependencies" : "zlib,szip,curl,hdf5",
-    "download" : "git clone --depth 1 --branch v$VERSION https://github.com/Unidata/netcdf-c.git netcdf-c-$VERSION",
-    "configure" : "./configure --prefix=$PREFIX CPPFLAGS=-I$PREFIX/include LDFLAGS=-L$PREFIX/lib $SHARED",
-    "build" : "make -j $BUILDTHREADS",
-    "install" : "make install",
-    "object files" : "435"
-}

config/netcdf_f.json

@@ -1,10 +0,0 @@
-{
-    "name" : "netcdf-f",
-    "default version" : "4.5.3",
-    "dependencies" : "zlib,szip,hdf5,curl,netcdf-c",
-    "download" : "git clone --depth 1 --branch v$VERSION https://github.com/Unidata/netcdf-fortran.git netcdf-f-$VERSION",
-    "configure" : "./configure --prefix=$PREFIX CPPFLAGS=-I$PREFIX/include LDFLAGS=-L$PREFIX/lib  $SHARED",
-    "build" : "make -j $BUILDTHREADS",
-    "install" : "make install",
-    "object files" : "60"
-}

lib/dependency.py

@@ -1,4 +1,5 @@
 import os
+import glob
 from lib.io import load_lib_data
 
 def topological_sort(source):
@@ -58,7 +59,7 @@ def load_dependencies(library, selected_libs, config_dir):
     lib_names = []
     for lib in selected_libs:
         lib_names.append(lib['name'])
-    
+
     dependencies = library['dependencies'].split(',')
     for dep in dependencies:
         if len(dep) > 1:
@@ -78,8 +79,6 @@ def load_selected_libs(config_dir, arg_namespace, args, install_all_libs, ignore
     if install_all_libs:
         for config_file in glob.glob(config_dir+"/*.json"):
             data = load_lib_data(config_file)
-            #with open(cf, 'r') as f:
-                #data = json.load(f)
             data['version'] = data['default version']
             selected_libs.append(data)
     else:
@@ -94,10 +93,10 @@ def load_selected_libs(config_dir, arg_namespace, args, install_all_libs, ignore
                     data = load_lib_data(config_file)
                     data['version'] = version
                     selected_libs.append(data)
-    
+
     if not ignore_deps:
         # also add all dependencies to the install list
         for lib in selected_libs:
             load_dependencies(lib, selected_libs, config_dir)
-    
+
     return selected_libs

lib/io.py

@@ -1,7 +1,8 @@
 import json
 
+
 # load library data from json file
 def load_lib_data(lib_path):
     with open (lib_path, 'r') as config_file:
         data = json.load(config_file)
-        return data
+        return data

lib/toolchain.py

@@ -6,11 +6,17 @@ from lib.shell import get_from_command
 def get_compiler_version(compiler):
     if compiler == "gnu":
         cc = "gcc"
+        compstr = get_from_command([cc, "-dumpversion"]).strip()
     elif compiler == "intel":
         cc = "icc"
+        compstr = get_from_command([cc, "-dumpversion"]).strip()
     elif compiler == "aocc":
         cc = "clang"
-    compstr = get_from_command([cc, "-dumpversion"]).strip()
+        compstr = get_from_command([cc, "-dumpversion"]).strip()
+    elif compiler == "nec":
+        cc = "ncc"
+        rawstr = get_from_command([cc, "--version"])
+        compstr = rawstr.split()[2]
     return compstr
 
 
@@ -30,6 +36,9 @@ def get_mpi_version(mpi):
     elif mpi == "mpich":
         rawstr = get_from_command(["mpirun", "--version"])
         mpistr = rawstr.split()[4]
+    elif mpi == "necmpi":
+        rawstr = get_from_command(["mpirun", "--version"])
+        mpistr = rawstr.split()[4]
     return mpistr
 
 
@@ -44,9 +53,9 @@ def set_toolchain(compiler, mpi):
             cxx = "mpicxx"
             fc = "mpif90"
         elif mpi == "necmpi":
-            cc = "\"mpincc -vh\""
-            cxx = "\"mpinc++ -vh\""
-            fc = "\"mpinfort -vh\""
+            cc = "mpincc -vh"
+            cxx = "mpinc++ -vh"
+            fc = "mpinfort -vh"
             os.environ["NMPI_CC_H"] = "gcc"
             os.environ["NMPI_CXX_H"] = "g++"
             os.environ["NMPI_FC_H"] = "gfortran"
@@ -61,13 +70,13 @@ def set_toolchain(compiler, mpi):
             os.environ["OMPI_MPIF90"] = "flang"
             os.environ["OMPI_MPIF77"] = "flang"
         elif (mpi == "intelmpi"):
-            cc = "\"mpicc -cc=clang\""
-            cxx = "\"mpicxx -cxx=clang++\""
-            fc = "\"mpif90 -fc=flang\""
+            cc = "mpicc -cc=clang"
+            cxx = "mpicxx -cxx=clang++"
+            fc = "mpif90 -fc=flang"
         elif mpi == "necmpi":
-            cc = "\"mpincc -vh\""
+            cc = "mpincc -vh"
             cxx = "mpic++ -vh"
-            fc = "\"mpinfort -vh\""
+            fc = "mpinfort -vh"
             os.environ["NMPI_CC_H"] = "clang"
             os.environ["NMPI_CXX_H"] = "clang++"
             os.environ["NMPI_FC_H"] = "flang"
@@ -86,9 +95,9 @@ def set_toolchain(compiler, mpi):
             cxx = "mpiicpc"
             fc = "mpiifort"
         elif mpi == "necmpi":
-            cc = "\"mpincc -vh\""
+            cc = "mpincc -vh"
             cxx = "mpic++ -vh"
-            fc = "\"mpinfort -vh\""
+            fc = "mpinfort -vh"
             os.environ["NMPI_CC_H"] = "icc"
             os.environ["NMPI_CXX_H"] = "icpc"
             os.environ["NMPI_FC_H"] = "ifort"
@@ -97,7 +106,7 @@ def set_toolchain(compiler, mpi):
         cc = "mpincc"
         cxx = "mpinc++"
         fc = "mpinfort"
-    
+
     # set environment variables
     os.environ["CC"] = cc
     os.environ["CXX"] = cxx

libinstaller

@@ -8,7 +8,7 @@ from lib.dependency import sort_libs_by_dependencies, load_selected_libs
 from lib.installer import install_lib
 from lib.init import init, check_python_version
 
-SCRIPT_VERSION = "v0.9"
+SCRIPT_VERSION = "v1.0"
 
 # check if Python >=3.3.0 is used
 check_python_version()
@@ -33,31 +33,6 @@ ignore_deps = arg_namespace.ignore_deps
 
 # extract libraries and versions selected for installation
 selected_libs = load_selected_libs(config_dir, arg_namespace, args, install_all_libs, ignore_deps)
-'''
-selected_libs = []
-if install_all_libs:
-    for config_file in glob.glob(config_dir+"/*.json"):
-        data = load_lib_data(config_file)
-        #with open(cf, 'r') as f:
-            #data = json.load(f)
-        data['version'] = data['default version']
-        selected_libs.append(data)
-else:
-    ignore_names = ["config", "mpi", "compiler", "prefix", "src", "work", "keep_work", "threads", "verbose", "version", "disable_shared"]
-    for lib_name in args:
-        if lib_name not in ignore_names and "version" not in lib_name:
-            install = getattr(arg_namespace, lib_name)
-            if install:
-                version = getattr(arg_namespace, lib_name+"_version")
-                config_file = config_dir + "/" + lib_name + ".json"
-                data = load_lib_data(config_file)
-                data['version'] = data['default version']
-                selected_libs.append(data)
-                #with open(config_file, 'r') as cf:
-                    #data = json.load(cf)
-                    #data['version'] = version
-                    #selected_libs.append(data)
-'''
 
 # set up install directory name
 compiler_version = get_compiler_version(compiler)